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11 Commits

Author SHA1 Message Date
Andrew Ashikhmin
62a3060555
Avoid redefinitions in gsacak.h (#602) 2022-08-24 15:29:17 +02:00
Alex Sharov
0b68b61b52
fix for loop 2022-08-14 10:21:38 +07:00
Enrique Jose Avila Asapche
491cdeb434
fixing c-99 (#579) 
* fixing c-99

* using c99 at compile

* back to before

Co-authored-by: Enrique Jose Avila Asapche <enriavil1@Enriques-MacBook-Pro-2.local>
 2022-08-13 18:15:35 +03:00
Alex Sharov
1e029ac6d8
go1.19 gofmt (#576) 
* save

* save
 2022-08-10 19:00:19 +07:00
Alex Sharov
5315a677b5
gsa example to calc repeats (#403) 2022-03-28 10:52:39 +07:00
Alex Sharov
dff0f93abb
GSA simplify and more examples (#402) 2022-03-28 09:02:01 +07:00
Alex Sharov
8846b406eb
gsa: remove terminator (make it closer to SAIS) #400 2022-03-27 13:41:16 +07:00
alex.sharov
3de8cfedd0 gsa print 2022-03-27 11:36:30 +07:00
Alex Sharov
2c61236c58
Generalized suffix array (#396) 
* gsa

* gsa

* save

* save
 2022-03-26 20:47:27 +07:00
Alex Sharov
83951a1d62
Enable more linters (#381) 2022-03-19 11:38:37 +07:00
ledgerwatch
75b52ac25e
[compress] Allow uncompressed words (#350) 
* Intermediate work

* Allow uncompressed words

* Fix

* Fix tests

* Add NextUncompressed, remove g.word buffer

* Code simplifications, no goroutines when workers == 1

* Fix lint|

* Add test for MatchPrefix

* Work on patricia

* Beginning of new matcher

* Fuzz test for new longest match

* No skip

* Fixes

* Fixes

* More tracing

* Fixes

* Fixes

* Change back to old FindLongestMatches

* Switch to old match finder

* Print mismatches

* Fix

* After fix

* After fix

* After fix

* Print pointers

* Fixes and tests

* Print

* Print

* Print

* More tests

* Intermediate

* Fix

* Fix

* Prints

* Fix

* Fix

* Initialise matchStack

* Compute only once

* Compute only once

* Switch back

* Switch to old Find

* Introduce sais

* Switch patricia to sais

* Use sais in compressor

* Use sais in compressor

* Remove unused code

Co-authored-by: Alexey Sharp <alexeysharp@Alexeys-iMac.local>
Co-authored-by: Alex Sharp <alexsharp@Alexs-MacBook-Pro.local>
 2022-03-09 17:25:22 +00:00